STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
themis2Thymocyte selection associated family member 2. (703 aa)    
Predicted Functional Partners:
grb2
Growth factor receptor-bound protein 2b.
   
 
 0.694
sec63
SEC63 homolog, protein translocation regulator.
      
 0.607
smpdl3b
Acid sphingomyelinase-like phosphodiesterase.
      
 0.549
ENSPREP00000014352
XK-related protein.
      
 0.549
TMEM43
Uncharacterized protein.
      
 0.532
fbxl5
F-box and leucine-rich repeat protein 5.
      
 0.532
ENSPREP00000004255
ANK_REP_REGION domain-containing protein.
    
 
 0.528
bahd1
Bromo adjacent homology domain containing 1.
      
 0.528
LOC103479131
Diencephalon/mesencephalon homeobox 1a.
      
 0.526
pcgf5
Polycomb group ring finger 5a.
      
 0.522
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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