STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
pofut1Protein O-fucosyltransferase 1. (397 aa)    
Predicted Functional Partners:
pofut2
Protein O-fucosyltransferase 2.
   
 
0.975
poglut1
Protein O-glucosyltransferase 1.
   
 
 0.899
LOC103473440
Notch receptor 1a.
    
 0.828
notch1
Notch receptor 1b.
    
 0.828
slc35c1
Solute carrier family 35 member C1.
      
 0.670
tsr3
Probable ribosome biogenesis protein; Probable pre-rRNA processing protein involved in ribosome biogenesis.
      
 0.670
LOC103463625
Notch receptor 2.
    
 0.619
fut8
Alpha-(1,6)-fucosyltransferase; Catalyzes the addition of fucose in alpha 1-6 linkage to the first GlcNAc residue, next to the peptide chains in N-glycans. Belongs to the glycosyltransferase 23 family.
      
 0.606
slc35b4
Solute carrier family 35 member B4.
      
 0.605
eogt
EGF domain-specific O-linked N-acetylglucosamine (GlcNAc) transferase.
      
 0.598
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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