STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
heltHelt bHLH transcription factor. (233 aa)    
Predicted Functional Partners:
mlx
MAX dimerization protein MLX.
      
 0.597
emc8
ER membrane protein complex subunit 8.
      
 0.594
snx25
Sorting nexin 25.
      
 0.484
lrrc56
Leucine rich repeat containing 56.
      
 0.482
gins2
DNA replication complex GINS protein PSF2; Belongs to the GINS2/PSF2 family.
      
 0.470
LOC103475635
MAX network transcriptional repressor b.
    
 
 0.462
mnt
MAX network transcriptional repressor a.
    
 
 0.462
LOC103474875
Hairy-related 13.
      
 0.446
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.