STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103474770Beta-galactosidase. (590 aa)    
Predicted Functional Partners:
neu1
Neuraminidase 1.
  
 0.679
gusb
Beta-glucuronidase; Plays an important role in the degradation of dermatan and keratan sulfates; Belongs to the glycosyl hydrolase 2 family.
  
 
 0.621
mars2
Methionyl-tRNA synthetase 2, mitochondrial; Belongs to the class-I aminoacyl-tRNA synthetase family.
    
   0.605
rbbp5
Retinoblastoma binding protein 5.
    
 0.597
ash2l
Ash2 like, histone lysine methyltransferase complex subunit.
    
 0.585
LOC103460505
Zgc:136461; Belongs to the peptidase S1 family.
     
 0.560
gla
Alpha-galactosidase.
  
  
 0.556
Gm2a
GM2 ganglioside activator.
     
 0.555
glb1
Beta-galactosidase.
     
 0.521
LOC103461671
Galactosidase, beta 1-like; Belongs to the glycosyl hydrolase 35 family.
     
 0.521
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.