STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103466933BTB domain-containing protein. (527 aa)    
Predicted Functional Partners:
LOC103479391
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.849
LOC103474461
Cullin 3; Belongs to the cullin family.
    
 0.849
klhl6
Kelch-like family member 6.
  
 
 
0.614
cerkl
Ceramide kinase-like.
      
 0.584
LOC103478148
Interleukin 6 receptor.
      
 0.579
ttc8
Tetratricopeptide repeat domain 8.
    
 0.577
CXorf40A
Chromosome X open reading frame 40A.
    
   0.543
ubxn7
UBX domain protein 7.
    
  0.526
TOMM7
Translocase of outer mitochondrial membrane 7.
      
 0.525
srbd1
S1 RNA binding domain 1.
      
 0.524
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.