STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
sowahaSosondowah ankyrin repeat domain family member Ab. (419 aa)    
Predicted Functional Partners:
LOC103460395
Uncharacterized protein.
    
 0.774
diaph2
Diaphanous-related formin 2.
   
 0.549
DIAPH1
Diaphanous related formin 1.
   
 0.549
diaph3
Diaphanous-related formin 3.
   
 0.549
CCDC157
Coiled-coil domain containing 157.
   
 
 0.545
traf7
TNF receptor-associated factor 7.
    
 0.544
LOC103464942
V-set and transmembrane domain containing 2 like.
      
 0.475
VSTM2L
V-set and transmembrane domain containing 2 like.
      
 0.475
zmat5
Zinc finger, matrin-type 5.
    
 
 0.474
LOC103464156
Deoxyribonuclease II beta.
      
 0.457
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.