STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
skp1S-phase kinase-associated protein 1; Belongs to the SKP1 family. (107 aa)    
Predicted Functional Partners:
fbxw11
F-box and WD repeat domain containing 11a.
    
 0.999
skp2
F-box domain-containing protein.
   
 0.999
cul1
Cullin 1b; Belongs to the cullin family.
   
 0.999
rbx1
Ring-box 1, E3 ubiquitin protein ligase.
   
 0.999
fbxo5
F-box protein 5.
    
 0.997
fbxw8
F-box and WD repeat domain containing 8.
    
 0.997
cacybp
Calcyclin binding protein.
   
 0.994
nfkbia
Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha b.
   
 0.992
LOC103457805
Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha a.
   
 0.992
fbxo9
F-box protein 9.
    
 0.983
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.