STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103473547SHSP domain-containing protein; Belongs to the small heat shock protein (HSP20) family. (204 aa)    
Predicted Functional Partners:
itfg2
Integrin alpha FG-GAP repeat containing 2.
    
   0.742
pars2
Prolyl-tRNA synthetase 2, mitochondrial.
    
 
 0.500
hspb8
Heat shock protein b8; Belongs to the small heat shock protein (HSP20) family.
      
 0.498
bag3
BCL2 associated athanogene 3.
   
 
 0.468
hspb11
Zgc:158640.
      
 0.457
LOC103474533
Crystallin, beta A1a; Belongs to the beta/gamma-crystallin family.
   
 
 0.455
hspb7
Heat shock protein family, member 7 (cardiovascular); Belongs to the small heat shock protein (HSP20) family.
      
 0.439
LOC103464872
MAPK activated protein kinase 2a; Belongs to the protein kinase superfamily.
    
 0.416
MAPKAPK3
MAPK activated protein kinase 3; Belongs to the protein kinase superfamily.
    
 0.416
mapkapk5
MAPK activated protein kinase 5.
    
 0.416
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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