STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PET117PET117 cytochrome c oxidase chaperone. (79 aa)    
Predicted Functional Partners:
LOC103478033
Cytochrome c oxidase copper chaperone COX17.
   
  
 0.715
LOC103479918
Cytochrome C oxidase assembly factor 5.
   
  
 0.674
LOC103476923
Cytochrome c oxidase assembly homolog 15 (yeast).
    
 
 0.669
pet100
Uncharacterized protein.
   
  
 0.667
LOC103481890
Cytochrome c oxidase assembly homolog 11 (yeast).
    
 
 0.564
gtpbp8
GTP binding protein 8 (putative).
      
 0.540
bola1
BolA family member 1; Belongs to the BolA/IbaG family.
      
 0.539
ENSPREP00000007569
Uncharacterized protein.
      
 0.470
surf1
SURF1-like protein; Probably involved in the biogenesis of the COX complex. Belongs to the SURF1 family.
      
 0.470
ENSPREP00000010130
Uncharacterized protein.
      
 0.467
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.