STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PET117PET117 cytochrome c oxidase chaperone. (79 aa)    
Predicted Functional Partners:
pet100
Uncharacterized protein.
   
 
 0.822
LOC103481890
Cytochrome c oxidase assembly homolog 11 (yeast).
    
 
 0.805
LOC103476923
Cytochrome c oxidase assembly homolog 15 (yeast).
    
 
 0.780
ATP6
ATP synthase subunit a.
    
 
 0.726
LOC103479918
Cytochrome C oxidase assembly factor 5.
   
  
 0.693
LOC103478033
Cytochrome c oxidase copper chaperone COX17.
   
  
 0.666
pum1
Pumilio RNA-binding family member 1.
    
 
 0.659
pum2
Pumilio RNA-binding family member 2.
    
 
 0.659
Pum2
Uncharacterized protein.
    
 
 0.659
gtpbp8
GTP binding protein 8 (putative).
      
 0.603
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.