STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PCMTD2Protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2. (340 aa)    
Predicted Functional Partners:
cul5
Cullin 5; Belongs to the cullin family.
    
 
 0.653
CUL5
Cullin 5; Belongs to the cullin family.
    
 
 0.653
wdyhv1
WDYHV motif containing 1.
      
 0.601
ankef1
Ankyrin repeat and EF-hand domain containing 1a.
      
 0.593
slc25a32
Solute carrier family 25 member 32b; Belongs to the mitochondrial carrier (TC 2.A.29) family.
      
 0.582
tmem64
Transmembrane protein 64.
      
 0.580
pus7
Pseudouridine synthase 7.
     
 0.538
tmem254
Transmembrane protein 254.
   
 
 0.530
rnf7
Ring finger protein 7.
   
   0.504
scaf11
RING-type domain-containing protein.
      
 0.495
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.