STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
acsl1Acyl-CoA synthetase long chain family member 1a. (698 aa)    
Predicted Functional Partners:
fasn
Coiled-coil domain containing 57.
    
 0.925
acox1
Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.
  
 0.775
LOC103470977
Acyl-CoA synthetase long chain family member 4a.
  
0.730
acsl3
Uncharacterized protein.
  
0.726
LOC103479395
Acyl-CoA synthetase long chain family member 3b.
  
0.726
LOC103466156
Carnitine palmitoyltransferase 1Ab (liver); Belongs to the carnitine/choline acetyltransferase family.
   
 
 0.725
tp53
Cellular tumor antigen p53; Acts as a tumor suppressor in many tumor types; induces growth arrest or apoptosis depending on the physiological circumstances and cell type. Involved in cell cycle regulation as a trans-activator that acts to negatively regulate cell division by controlling a set of genes required for this process. One of the activated genes is an inhibitor of cyclin-dependent kinases. Apoptosis induction seems to be mediated either by stimulation of BAX and FAS antigen expression, or by repression of Bcl-2 expression; Belongs to the p53 family.
   
 0.718
LOC103468298
Carnitine palmitoyltransferase 1Cb; Belongs to the carnitine/choline acetyltransferase family.
   
 
 0.699
cpt1b
Carnitine palmitoyltransferase 1B (muscle); Belongs to the carnitine/choline acetyltransferase family.
   
 
 0.699
LOC103481241
Carnitine palmitoyltransferase 1C; Belongs to the carnitine/choline acetyltransferase family.
   
 
 0.699
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.