Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103475357Uncharacterized protein. (299 aa)    
Predicted Functional Partners:
aff1
Uncharacterized protein.
    
 0.614
aff4
AF4/FMR2 family, member 4.
    
 0.554
ENSPREP00000007590
Cyclin I family, member 2; Belongs to the cyclin family.
    
 0.508
ccni
Cyclin I; Belongs to the cyclin family.
    
 0.508
gns
N-acetylglucosamine-6-sulfatase; Belongs to the sulfatase family.
    
 0.498
LOC103473209
N-acetylglucosamine-6-sulfatase; Belongs to the sulfatase family.
    
 0.498
ENSPREP00000007673
ASD1 domain-containing protein.
      
 0.493
ift81
Intraflagellar transport 81 homolog.
    
 0.442
ccng1
CYCLIN domain-containing protein; Belongs to the cyclin family.
    
 0.440
traf7
TNF receptor-associated factor 7.
    
 0.415
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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