STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
prdm2PR domain containing 2, with ZNF domain b. (1578 aa)    
Predicted Functional Partners:
LOC103477617
C-type lectin domain-containing protein.
    
 0.632
LOC103477618
C-type lectin domain-containing protein.
    
 0.632
LOC103477620
C-type lectin domain-containing protein.
    
 0.632
ENSPREP00000028081
C-type lectin domain-containing protein.
    
 0.632
ENSPREP00000014234
C-type lectin domain-containing protein.
    
 0.624
znf512
Zinc finger protein 512.
    
 
 0.578
LOC103464518
TAR DNA binding protein.
      
 0.571
tardbp
TAR DNA binding protein, like.
      
 0.571
LOC103468460
E1A binding protein p300 b.
   
 
 0.434
LOC103482005
E1A binding protein p300 a.
   
 
 0.434
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.