STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
prdm2PR domain containing 2, with ZNF domain b. (1578 aa)    
Predicted Functional Partners:
CAMKMT
Calmodulin-lysine N-methyltransferase.
     
 0.663
plod1
Procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1a.
     
  0.650
plod2
Procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2.
     
  0.650
LOC103477617
C-type lectin domain-containing protein.
    
 0.634
LOC103477618
C-type lectin domain-containing protein.
    
 0.634
LOC103477620
C-type lectin domain-containing protein.
    
 0.634
ENSPREP00000028081
C-type lectin domain-containing protein.
    
 0.634
lsm10
LSM10, U7 small nuclear RNA associated.
      
 0.618
LOC103472762
Ash1 (absent, small, or homeotic)-like (Drosophila).
   
 0.611
LOC103460107
RAB11a, member RAS oncogene family.
    
 0.608
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.