STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
chn1Chimerin 1. (276 aa)    
Predicted Functional Partners:
cav2
Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family.
     
 0.580
nck2
Cytoplasmic protein.
    
 0.577
nck1
Cytoplasmic protein.
    
 0.577
hemk1
HemK methyltransferase family member 1.
    
   0.533
Slc31a2
Solute carrier family 31 member 2.
      
 0.487
CDC42
Cell division cycle 42.
    
 0.480
LOC103465423
Cell division cycle 42.
    
 0.480
LOC103479675
Rac family small GTPase 2.
    
 0.464
LOC103482188
Rac family small GTPase 3b.
    
 0.464
RAC1
Rac family small GTPase 1.
    
 0.464
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.