STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
sall2Si:ch211-212k18.5. (1210 aa)    
Predicted Functional Partners:
bsx
Brain-specific homeobox.
   
 0.541
ENSPREP00000018784
Uncharacterized protein.
    
 0.459
crybb1
Crystallin, beta B1; Belongs to the beta/gamma-crystallin family.
   
  
 0.450
bfsp2
Beaded filament structural protein 2, phakinin; Belongs to the intermediate filament family.
    
 
 0.440
crbn
Cereblon.
    
 
 0.439
VSX2
Visual system homeobox 2.
      
 0.433
Six3
SIX homeobox 3a.
   
 
 0.432
LOC103478462
Uncharacterized protein.
  
 
  0.432
LOC103463694
GATA zinc finger domain containing 2Ab.
    
 0.429
LOC103479433
Uncharacterized protein.
    
 0.429
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.