STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ttc37Tetratricopeptide repeat domain 37. (1569 aa)    
Predicted Functional Partners:
skiv2l
SKI2 homolog, superkiller viralicidic activity 2-like.
   
 0.999
wdr61
WD repeat domain 61.
   
 0.998
exosc9
Exosome component 9.
    
 0.974
hbs1l
HBS1-like translational GTPase.
    
 0.963
exosc2
Exosome component 2.
    
 0.962
ENSPREP00000026599
Exosome component 7.
    
 0.956
exosc1
Exosome component 1.
    
 0.949
exosc3
Exosome component 3.
    
 0.948
exosc4
Exosome component 4.
    
 0.944
exosc5
Exosome component 5.
    
 0.941
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.