STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ttc37Tetratricopeptide repeat domain 37. (1569 aa)    
Predicted Functional Partners:
skiv2l
SKI2 homolog, superkiller viralicidic activity 2-like.
   
 0.999
wdr61
WD repeat domain 61.
    
 0.999
mtrex
Mtr4 exosome RNA helicase.
   
 0.958
ipo8
Importin N-terminal domain-containing protein.
   
 0.928
ipo7
Importin 7.
   
 0.928
exosc9
Exosome component 9.
    
 0.905
hbs1l
HBS1-like translational GTPase.
    
 0.904
exosc5
Exosome component 5.
    
 0.877
exosc1
Exosome component 1.
     
 0.872
rack1
Receptor for activated C kinase 1.
    
   0.872
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.