STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103464484Forkhead box J3. (605 aa)    
Predicted Functional Partners:
zar1l
Zygote arrest 1-like.
  
   
 0.626
ENSPREP00000017737
Uncharacterized protein.
    
 0.511
LOC103476576
BTB domain-containing protein.
      
 0.477
LOC103467255
BTB domain-containing protein.
      
 0.477
LOC103462437
SRY-box transcription factor 6.
    
 
 0.452
tfap2e
Transcription factor AP-2 epsilon.
      
 0.443
nf1
Neurofibromin 1b.
   
  
 0.441
LOC103465550
Host cell factor C1a.
  
 
 0.416
LOC103468460
E1A binding protein p300 b.
   
 0.404
LOC103482005
E1A binding protein p300 a.
   
 0.404
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.