snrnp40 protein (Poecilia reticulata) - STRING interaction network

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Score

snrnp40

Small nuclear ribonucleoprotein 40 (U5). (347 aa)

Predicted Functional Partners:

ddx23

0.999

prpf6

0.999

prpf8

0.999

snrnp200

0.997

txnl4a

0.995

snrpe

0.994

Snrpd2

0.988

EFTUD2

0.983

ENSPREP00000012415

0.983

Prpf4

0.982

Your Current Organism:

Poecilia reticulata

NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EFTUD2	ENSPREP00000012415	ENSPREP00000012394	ENSPREP00000012415	Elongation factor Tu GTP binding domain containing 2.	EFG_C domain-containing protein.	0.952
EFTUD2	Prpf4	ENSPREP00000012394	ENSPREP00000025096	Elongation factor Tu GTP binding domain containing 2.	WD_REPEATS_REGION domain-containing protein.	0.967
EFTUD2	Snrpd2	ENSPREP00000012394	ENSPREP00000005996	Elongation factor Tu GTP binding domain containing 2.	Small nuclear ribonucleoprotein Sm D2.	0.936
EFTUD2	ddx23	ENSPREP00000012394	ENSPREP00000010375	Elongation factor Tu GTP binding domain containing 2.	DEAD (Asp-Glu-Ala-Asp) box polypeptide 23.	0.984
EFTUD2	prpf6	ENSPREP00000012394	ENSPREP00000026633	Elongation factor Tu GTP binding domain containing 2.	PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae).	0.994
EFTUD2	prpf8	ENSPREP00000012394	ENSPREP00000032359	Elongation factor Tu GTP binding domain containing 2.	Pre-mRNA processing factor 8.	0.994
EFTUD2	snrnp200	ENSPREP00000012394	ENSPREP00000013242	Elongation factor Tu GTP binding domain containing 2.	Small nuclear ribonucleoprotein 200 (U5).	0.995
EFTUD2	snrnp40	ENSPREP00000012394	ENSPREP00000007740	Elongation factor Tu GTP binding domain containing 2.	Small nuclear ribonucleoprotein 40 (U5).	0.983
EFTUD2	snrpe	ENSPREP00000012394	ENSPREP00000026678	Elongation factor Tu GTP binding domain containing 2.	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.985
EFTUD2	txnl4a	ENSPREP00000012394	ENSPREP00000026854	Elongation factor Tu GTP binding domain containing 2.	Thioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family.	0.985
ENSPREP00000012415	EFTUD2	ENSPREP00000012415	ENSPREP00000012394	EFG_C domain-containing protein.	Elongation factor Tu GTP binding domain containing 2.	0.952
ENSPREP00000012415	Prpf4	ENSPREP00000012415	ENSPREP00000025096	EFG_C domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.967
ENSPREP00000012415	Snrpd2	ENSPREP00000012415	ENSPREP00000005996	EFG_C domain-containing protein.	Small nuclear ribonucleoprotein Sm D2.	0.936
ENSPREP00000012415	ddx23	ENSPREP00000012415	ENSPREP00000010375	EFG_C domain-containing protein.	DEAD (Asp-Glu-Ala-Asp) box polypeptide 23.	0.984
ENSPREP00000012415	prpf6	ENSPREP00000012415	ENSPREP00000026633	EFG_C domain-containing protein.	PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae).	0.994
ENSPREP00000012415	prpf8	ENSPREP00000012415	ENSPREP00000032359	EFG_C domain-containing protein.	Pre-mRNA processing factor 8.	0.994
ENSPREP00000012415	snrnp200	ENSPREP00000012415	ENSPREP00000013242	EFG_C domain-containing protein.	Small nuclear ribonucleoprotein 200 (U5).	0.995
ENSPREP00000012415	snrnp40	ENSPREP00000012415	ENSPREP00000007740	EFG_C domain-containing protein.	Small nuclear ribonucleoprotein 40 (U5).	0.983
ENSPREP00000012415	snrpe	ENSPREP00000012415	ENSPREP00000026678	EFG_C domain-containing protein.	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.985
ENSPREP00000012415	txnl4a	ENSPREP00000012415	ENSPREP00000026854	EFG_C domain-containing protein.	Thioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family.	0.985