STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mtres1Si:ch211-206k20.5. (219 aa)    
Predicted Functional Partners:
ENSPREP00000027804
RF_PROK_I domain-containing protein.
    
 
 0.784
mrpl16
Mitochondrial ribosomal protein L16.
   
   0.742
mrpl33
Mitochondrial ribosomal protein L33.
    
   0.736
clg9h12orf65
Si:ch211-275j6.5.
    
 
 0.735
mrpl40
Mitochondrial ribosomal protein L40.
   
   0.730
mrpl9
Mitochondrial ribosomal protein L9.
   
   0.728
mrpl13
Mitochondrial ribosomal protein L13.
   
   0.721
mrpl22
Mitochondrial ribosomal protein L22; Belongs to the universal ribosomal protein uL22 family.
    
   0.712
mrpl54
Mitochondrial ribosomal protein L54.
    
   0.707
sec63
SEC63 homolog, protein translocation regulator.
      
 0.677
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.