STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ppcsPhosphopantothenoylcysteine synthetase. (322 aa)    
Predicted Functional Partners:
ppcdc
Phosphopantothenoylcysteine decarboxylase.
    
 0.993
LOC103476444
Pantothenate kinase 1a.
     
 0.965
pank2
Pantothenate kinase 2.
     
 0.965
coasy
CoA synthase.
  
 0.959
pank4
Pantothenate kinase.
     
 0.947
LOC103482046
Cytochrome c oxidase assembly factor COX19.
    
 0.908
HLCS
Holocarboxylase synthetase.
  
 
 0.845
kyat3
Kynurenine aminotransferase 3.
  
  0.826
kyat1
Kynurenine aminotransferase 1.
  
  0.826
cth
Cystathionase (cystathionine gamma-lyase), like.
   
 
 0.809
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.