STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPREP00000007769Filamin binding LIM protein 1. (273 aa)    
Predicted Functional Partners:
fermt2
Fermitin family member 2.
    
 0.951
fermt1
Fermitin family member 1.
    
 0.951
cuta
Uncharacterized protein.
    
 
 0.928
ENSPREP00000005335
Calponin-homology (CH) domain-containing protein.
   
 0.843
ENSPREP00000006034
Uncharacterized protein.
   
 0.843
ENSPREP00000006052
Calponin-homology (CH) domain-containing protein.
   
 0.843
LOC103466954
Uncharacterized protein.
   
 0.843
flnc
Filamin C, gamma b (actin binding protein 280).
   
 0.843
flnb
Filamin B.
   
 0.843
fermt3
Fermitin family member 3b.
    
 0.819
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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