Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TCTEX1D1Tctex1 domain containing 1. (171 aa)    
Predicted Functional Partners:
dync2li1
Dynein, cytoplasmic 2, light intermediate chain 1.
   
 0.914
LOC103474153
Dynein light chain.
    
 0.886
ENSPREP00000014727
Dynein light chain.
    
 0.886
LOC103470030
Dynein light chain.
    
 0.886
LOC103475484
Dynein light chain.
    
 0.886
DYNLRB2
Dynein light chain roadblock.
  
 0.881
LOC103456667
Uncharacterized protein.
    
 0.876
DYNLT3
Dynein, light chain, Tctex-type 3.
    
 0.876
dynlt1
Dynein, light chain, Tctex-type 1.
    
 0.870
wdr34
WD repeat domain 34.
    
 0.847
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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