STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103458268Homeobox D12a. (248 aa)    
Predicted Functional Partners:
hand2
Heart and neural crest derivatives expressed 2.
    
 
 0.484
ENSPREP00000014536
Uncharacterized protein.
    
 
 0.453
nr0b2
Nuclear receptor subfamily 0, group B, member 2a.
    
 
 0.428
evx2
Even-skipped homeobox 2.
   
 
 0.420
sall1
Spalt-like transcription factor 1a.
    
 
 0.414
sall3
Spalt-like transcription factor 3a.
    
 
 0.414
ENSPREP00000021332
Uncharacterized protein.
    
 
 0.414
LOC103460338
Spalt-like transcription factor 3b.
    
 
 0.414
sall4
Spalt-like transcription factor 4.
    
 
 0.414
LOC103477848
Apolipoprotein Eb.
      
 0.407
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.