STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
mdm1Uncharacterized protein. (400 aa)    
Predicted Functional Partners:
gatb
Glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in the mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). Belongs to the GatB/GatE family. GatB subfamily.
      
 0.727
gpha2
Glycoprotein hormones alpha chain; Belongs to the glycoprotein hormones subunit alpha family.
      
 0.582
snx13
Sorting nexin 13.
      
 0.571
ENSPREP00000008276
Regulator of G protein signaling 2.
      
 0.462
LOC103463368
Regulator of G protein signaling 2.
      
 0.462
myf6
Myogenic factor 6.
      
 0.462
tmem25
Ig-like domain-containing protein.
      
 0.458
FILIP1L
Filamin A interacting protein 1 like.
      
 0.432
snx19
Sorting nexin 19b.
      
 0.419
mdm2
MDM2 proto-oncogene.
   
  
 0.419
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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