Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LOC103467065TBC1 domain family, member 22B. (374 aa)    
Predicted Functional Partners:
acbd3
Acyl-Coenzyme A binding domain containing 3.
    
 
 0.872
mrps9
Mitochondrial ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.
    
 
 0.788
mrps5
Mitochondrial ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family.
   
   0.765
mrps16
Mitochondrial ribosomal protein S16.
    
   0.751
cog6
Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.
    
   0.728
dap3
Death associated protein 3.
    
   0.728
Mrps6
Mitochondrial ribosomal protein S6.
    
   0.728
rps18
Ribosomal protein S18; Belongs to the universal ribosomal protein uS13 family.
    
 
 0.727
cog8
Conserved oligomeric Golgi complex subunit 8; Belongs to the COG8 family.
    
   0.708
arfrp1
ADP-ribosylation factor related protein 1.
   
   0.680
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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