STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103466257Aspartoacylase (aminocyclase) 3, tandem duplicate 2. (308 aa)    
Predicted Functional Partners:
skp1
S-phase kinase-associated protein 1; Belongs to the SKP1 family.
    
 0.746
rbx1
Ring-box 1, E3 ubiquitin protein ligase.
    
 0.616
rnf7
Ring finger protein 7.
    
 0.616
nat8l
N-acetyltransferase 8-like.
   
  
 0.590
trip12
Thyroid hormone receptor interactor 12.
   
 
 0.586
ENSPREP00000028517
ANK_REP_REGION domain-containing protein.
    
 0.553
cdc6
Cell division control protein; Involved in the initiation of DNA replication. Also participates in checkpoint controls that ensure DNA replication is completed before mitosis is initiated; Belongs to the CDC6/cdc18 family.
    
 
 0.537
cacul1
CDK2 associated cullin domain 1; Belongs to the cullin family.
    
 0.503
cul1
Cullin 1b; Belongs to the cullin family.
    
 0.503
LOC103479391
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.503
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.