Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
uhrf1bp1UHRF1 binding protein 1. (1335 aa)    
Predicted Functional Partners:
Dph6
Diphthine--ammonia ligase; Amidase that catalyzes the last step of diphthamide biosynthesis using ammonium and ATP.
      
 0.597
LOC103470136
cAMP responsive element binding protein 3-like 3 like.
    
   0.597
shq1
SHQ1, H/ACA ribonucleoprotein assembly factor.
      
 0.593
taf11
TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
      
 0.580
dalrd3
DALR anticodon binding domain containing 3.
      
 0.580
zcchc9
Zinc finger, CCHC domain containing 9.
      
 0.579
ints3
Integrator complex subunit 3.
      
 0.579
ZFC3H1
Zinc finger C3H1-type containing.
      
 0.516
xpo4
Exportin 4.
      
 0.503
synj1
Synaptojanin 1.
      
 0.503
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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