STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPREP00000007848Histone H2B; Belongs to the histone H2B family. (119 aa)    
Predicted Functional Partners:
ENSPREP00000033837
Histone H2A; Belongs to the histone H2A family.
 
 0.822
ENSPREP00000020417
Histone H2A; Belongs to the histone H2A family.
 
 0.820
ENSPREP00000000286
Histone H2A; Belongs to the histone H2A family.
 
 0.806
ENSPREP00000011186
Histone H2A; Belongs to the histone H2A family.
 
 0.805
ENSPREP00000011196
Histone H2A; Belongs to the histone H2A family.
 
 0.804
LOC103462478
Histone H2A; Belongs to the histone H2A family.
 
 0.794
ENSPREP00000012754
Histone H2A; Belongs to the histone H2A family.
 
 0.784
rps27a
Ribosomal protein S27a.
   
 0.781
uba52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
 0.775
ENSPREP00000007121
Histone H2A; Belongs to the histone H2A family.
 
 0.774
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.