STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103457483Otoferlin a. (1904 aa)    
Predicted Functional Partners:
get1
Guided entry of tail-anchored proteins factor 1.
     
 0.540
LOC103466091
Solute carrier family 17 member 8.
   
 
 0.537
adgrv1
Adhesion G protein-coupled receptor V1; Belongs to the G-protein coupled receptor 2 family.
      
 0.513
stox1
Storkhead box 1.
      
 0.503
glrx5
Glutaredoxin 5 homolog (S. cerevisiae).
      
 0.503
camlg
Calcium modulating ligand.
     
 0.480
ENSPREP00000016345
Zgc:92912.
     
 0.475
nfs1
NFS1 cysteine desulfurase.
      
 0.473
LOC103472839
Vesicle-associated membrane protein 1.
     
 0.443
ENSPREP00000002501
Vesicle-associated membrane protein 2.
     
 0.443
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.