STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103465147Si:ch1073-335m2.2. (3163 aa)    
Predicted Functional Partners:
LOC103469257
Recombination signal binding protein for immunoglobulin kappa J region a.
    
 
 0.700
rbpj
Recombination signal binding protein for immunoglobulin kappa J region.
    
 
 0.700
LOC103472997
MYC binding protein.
      
 0.630
huwe1
HECT, UBA and WWE domain containing E3 ubiquitin protein ligase 1.
   
  
 0.568
wtap
WT1 associated protein.
    
 
 0.539
nr1i2
Nuclear receptor subfamily 1, group I, member 2.
    
 
 0.499
zc3h13
Zinc finger CCCH-type containing 13.
   
 
 0.492
Mycbp2
RING-type domain-containing protein.
   
  
 0.490
ENSPREP00000010244
Uncharacterized protein.
   
  
 0.490
znf746
Kruppel-like factor 13.
   
 
 0.484
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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