Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LOC103465147Si:ch1073-335m2.2. (3163 aa)    
Predicted Functional Partners:
LOC103469257
Recombination signal binding protein for immunoglobulin kappa J region a.
    
 0.983
rbpj
Recombination signal binding protein for immunoglobulin kappa J region.
    
 0.983
spen
Spen family transcriptional repressor.
  
  
 
0.905
ENSPREP00000022458
LAG1_DNAbind domain-containing protein.
     
  0.900
wtap
WT1 associated protein.
    
 
 0.747
ncor2
Nuclear receptor corepressor 2.
   
 
 0.735
ncor1
Nuclear receptor corepressor 1.
   
 
 0.735
zc3h13
Zinc finger CCCH-type containing 13.
   
 
 0.642
thoc2
THO complex 2.
   
 
 0.617
ENSPREP00000007854
Uncharacterized protein.
    
 
 0.575
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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