STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rnf14RBR-type E3 ubiquitin transferase. (452 aa)    
Predicted Functional Partners:
LOC103475709
Androgen receptor.
    
 
 0.697
ar
Androgen receptor.
    
 
 0.697
crebrf
Creb3 regulatory factor.
    
 
 0.554
etf1
Eukaryotic translation termination factor 1b.
    
 
 0.547
dnaja1
DnaJ heat shock protein family (Hsp40) member A1.
      
 0.543
arih1
RBR-type E3 ubiquitin transferase.
     
0.513
rnf217
RBR-type E3 ubiquitin transferase.
     
0.513
dus2
Dihydrouridine synthase 2.
    
 
 0.507
atg7
ATG7 autophagy related 7 homolog (S. cerevisiae).
   
 
 0.474
rnf216
Ring finger protein 216.
     
0.460
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.