STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
cyhr1Cysteine/histidine-rich 1. (376 aa)    
Predicted Functional Partners:
zc3h3
Zinc finger CCCH-type containing 3.
      
 0.804
exosc4
Exosome component 4.
   
  
 0.624
vps28
Vacuolar protein sorting-associated protein 28 homolog; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process.
   
  
 0.616
fastkd1
FAST kinase domains 1.
      
 0.598
mkln1
Muskelin 1, intracellular mediator containing kelch motifs.
      
 0.586
LOC103474679
RAB guanine nucleotide exchange factor (GEF) 1, like.
    
  0.585
RABGEF1
RAB guanine nucleotide exchange factor 1.
    
  0.585
LOC103470250
Uncharacterized protein.
    
  0.585
tollip
Toll interacting protein.
    
   0.579
sharpin
SHANK-associated RH domain interacting protein.
   
  
 0.536
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
Server load: low (20%) [HD]