Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
CNIH2Cornichon family AMPA receptor auxiliary protein 2. (160 aa)    
Predicted Functional Partners:
GRIA2
Glutamate ionotropic receptor AMPA type subunit 2.
    
 0.852
LOC103470494
Uncharacterized protein.
    
 0.852
prrt1
Proline-rich transmembrane protein 1.
    
 
 0.773
cnih4
Cornichon family AMPA receptor auxiliary protein 4.
     
 0.772
tmed10
Transmembrane p24 trafficking protein 10.
   
 0.770
sec13
SEC13 homolog, nuclear pore and COPII coat complex component; Belongs to the WD repeat SEC13 family.
   
 0.750
LOC103476386
Uncharacterized protein.
   
 0.733
gria1
Glutamate receptor, ionotropic, AMPA 1a.
   
 0.733
cnih1
Cornichon family AMPA receptor auxiliary protein 1.
     
 0.728
LOC103471094
Uncharacterized protein.
   
 0.717
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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