ENSPREP00000007883 protein (Poecilia reticulata)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

ENSPREP00000007883

Dihydrodiol dehydrogenase (dimeric), like. (272 aa)

Predicted Functional Partners:

LOC103474700

0.706

LOC103481426

0.695

ALDH18A1

0.695

galk1

0.660

galk2

0.660

rgn

0.612

LOC103466890

0.599

kdsr

0.589

appbp2

0.585

kars1

0.562

Your Current Organism:

Poecilia reticulata

NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ALDH18A1	ENSPREP00000007883	ENSPREP00000013516	ENSPREP00000007883	Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.	Dihydrodiol dehydrogenase (dimeric), like.	0.695
ALDH18A1	LOC103481426	ENSPREP00000013516	ENSPREP00000000843	Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.	Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.	0.999
ALDH18A1	galk1	ENSPREP00000013516	ENSPREP00000001741	Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.	Galactokinase 1.	0.465
ALDH18A1	galk2	ENSPREP00000013516	ENSPREP00000023083	Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.	Galactokinase 2.	0.465
ALDH18A1	kars1	ENSPREP00000013516	ENSPREP00000034233	Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.	Lysine--tRNA ligase.	0.548
ENSPREP00000007883	ALDH18A1	ENSPREP00000007883	ENSPREP00000013516	Dihydrodiol dehydrogenase (dimeric), like.	Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.	0.695
ENSPREP00000007883	LOC103466890	ENSPREP00000007883	ENSPREP00000004591	Dihydrodiol dehydrogenase (dimeric), like.	Zgc:103759.	0.599
ENSPREP00000007883	LOC103474700	ENSPREP00000007883	ENSPREP00000003589	Dihydrodiol dehydrogenase (dimeric), like.	Arylacetamide deacetylase.	0.706
ENSPREP00000007883	LOC103481426	ENSPREP00000007883	ENSPREP00000000843	Dihydrodiol dehydrogenase (dimeric), like.	Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.	0.695
ENSPREP00000007883	appbp2	ENSPREP00000007883	ENSPREP00000022848	Dihydrodiol dehydrogenase (dimeric), like.	Amyloid beta precursor protein (cytoplasmic tail) binding protein 2.	0.585
ENSPREP00000007883	galk1	ENSPREP00000007883	ENSPREP00000001741	Dihydrodiol dehydrogenase (dimeric), like.	Galactokinase 1.	0.660
ENSPREP00000007883	galk2	ENSPREP00000007883	ENSPREP00000023083	Dihydrodiol dehydrogenase (dimeric), like.	Galactokinase 2.	0.660
ENSPREP00000007883	kars1	ENSPREP00000007883	ENSPREP00000034233	Dihydrodiol dehydrogenase (dimeric), like.	Lysine--tRNA ligase.	0.562
ENSPREP00000007883	kdsr	ENSPREP00000007883	ENSPREP00000006154	Dihydrodiol dehydrogenase (dimeric), like.	3-ketodihydrosphingosine reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	0.589
ENSPREP00000007883	rgn	ENSPREP00000007883	ENSPREP00000016235	Dihydrodiol dehydrogenase (dimeric), like.	Regucalcin.	0.612
LOC103466890	ENSPREP00000007883	ENSPREP00000004591	ENSPREP00000007883	Zgc:103759.	Dihydrodiol dehydrogenase (dimeric), like.	0.599
LOC103474700	ENSPREP00000007883	ENSPREP00000003589	ENSPREP00000007883	Arylacetamide deacetylase.	Dihydrodiol dehydrogenase (dimeric), like.	0.706
LOC103474700	appbp2	ENSPREP00000003589	ENSPREP00000022848	Arylacetamide deacetylase.	Amyloid beta precursor protein (cytoplasmic tail) binding protein 2.	0.404
LOC103481426	ALDH18A1	ENSPREP00000000843	ENSPREP00000013516	Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.	Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.	0.999
LOC103481426	ENSPREP00000007883	ENSPREP00000000843	ENSPREP00000007883	Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.	Dihydrodiol dehydrogenase (dimeric), like.	0.695