STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
cand1Cullin-associated and neddylation-dissociated 1. (1234 aa)    
Predicted Functional Partners:
cul1
Cullin 1b; Belongs to the cullin family.
   
 0.969
rbx1
Ring-box 1, E3 ubiquitin protein ligase.
    
 0.957
cul2
Cullin 2; Belongs to the cullin family.
    
 0.953
LOC103479391
CULLIN_2 domain-containing protein; Belongs to the cullin family.
   
 0.915
LOC103474461
Cullin 3; Belongs to the cullin family.
   
 0.915
cul5
Cullin 5; Belongs to the cullin family.
   
 0.905
CUL5
Cullin 5; Belongs to the cullin family.
   
 0.905
skp1
S-phase kinase-associated protein 1; Belongs to the SKP1 family.
    
 0.889
cul4b
Cullin 4B; Belongs to the cullin family.
   
 0.887
cul4a
Cullin 4A; Belongs to the cullin family.
   
 0.887
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.