STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tskuTsukushi small leucine rich proteoglycan homolog (Xenopus laevis). (348 aa)    
Predicted Functional Partners:
fchsd2
FCH and double SH3 domains 2.
     
 0.656
LOC103460347
ISY1 splicing factor homolog.
    
 
 0.654
tbrg1
Transforming growth factor beta regulator 1.
      
 0.647
acer3
Alkaline ceramidase; Hydrolyzes the sphingolipid ceramide into sphingosine and free fatty acid.
      
 0.646
P2RY6
Pyrimidinergic receptor P2Y6; Belongs to the G-protein coupled receptor 1 family.
      
 0.646
p2ry2
Purinergic receptor P2Y2, tandem duplicate 1; Belongs to the G-protein coupled receptor 1 family.
    
 
 0.646
myo7a
Myosin VIIAa; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
     
 0.638
LOC103462943
Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family.
    
   0.560
ENSPREP00000002714
SUEL-type lectin domain-containing protein.
    
   0.560
ENSPREP00000003616
Uncharacterized protein.
    
   0.560
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.