STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
tskuTsukushi small leucine rich proteoglycan homolog (Xenopus laevis). (348 aa)    
Predicted Functional Partners:
tbrg1
Transforming growth factor beta regulator 1.
      
 0.758
LOC103460347
ISY1 splicing factor homolog.
    
 
 0.708
p2ry2
Purinergic receptor P2Y2, tandem duplicate 1; Belongs to the G-protein coupled receptor 1 family.
    
 
 0.696
hspa13
Heat shock protein 70 family, member 13.
    
 
 0.615
ENSPREP00000031039
Rho guanine nucleotide exchange factor (GEF) 17.
   
  
 0.605
P2RY6
Pyrimidinergic receptor P2Y6; Belongs to the G-protein coupled receptor 1 family.
      
 0.604
acer3
Alkaline ceramidase; Hydrolyzes the sphingolipid ceramide into sphingosine and free fatty acid.
      
 0.603
fzd4
Frizzled class receptor 4; Belongs to the G-protein coupled receptor Fz/Smo family.
    
 0.594
epdr1
Ependymin related 1.
      
 0.593
picalm
Phosphatidylinositol binding clathrin assembly protein b.
      
 0.584
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.