STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
slc25a20Protein kinase, cAMP-dependent, regulatory, type II, alpha, B. (400 aa)    
Predicted Functional Partners:
prkaca
Uncharacterized protein; Belongs to the protein kinase superfamily.
 
 
 0.891
LOC103468785
Protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate a; Belongs to the protein kinase superfamily.
 
 
 0.891
LOC103479663
Protein kinase, cAMP-dependent, catalytic, beta b; Belongs to the protein kinase superfamily.
 
 
 0.891
prkacb
Uncharacterized protein; Belongs to the protein kinase superfamily.
 
 
 0.891
prkx
Protein kinase X-linked.
   
 0.880
akap10
A kinase (PRKA) anchor protein 10.
    
 0.843
akap1
A kinase (PRKA) anchor protein 1b.
    
 0.828
Akap14
Uncharacterized protein.
    
  0.827
gpr161
G protein-coupled receptor 161; Belongs to the G-protein coupled receptor 1 family.
    
 0.726
rsph3
Radial spoke head 3.
   
 0.695
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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