STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103474780Guanylate cyclase. (1100 aa)    
Predicted Functional Partners:
guca1b
Guanylate cyclase activator 1B.
   
 0.959
LOC103475015
Guanylate cyclase activator 1C.
   
 0.959
guca1a
Guanylate cyclase activator 1A.
   
 0.956
LOC103463003
Guanylate cyclase activator 1g.
    
 0.907
LOC103457410
Ectonucleotide pyrophosphatase/phosphodiesterase 1.
     
 0.904
LOC103472797
Uncharacterized protein.
     
 0.904
LOC103465677
Guanylate cyclase.
  
  
 
0.903
entpd1
Ectonucleoside triphosphate diphosphohydrolase 1; Belongs to the GDA1/CD39 NTPase family.
   
 
 0.903
LOC103463002
Uncharacterized protein.
    
 0.902
LOC103462899
Uncharacterized protein.
    
 0.902
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.