Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LOC103469883Zgc:112294. (218 aa)    
Predicted Functional Partners:
cc2d2a
Coiled-coil and C2 domain containing 2A.
    
 
 0.675
ttll10
Tubulin tyrosine ligase-like family, member 10.
      
 0.638
drc7
Uncharacterized protein.
      
 0.618
tmem231
Transmembrane protein 231.
    
 
 0.605
tmem218
Transmembrane protein 218.
   
  
 0.599
ENSPREP00000034087
DUF1619 domain-containing protein.
      
 0.599
ttc25
Tetratricopeptide repeat domain 25.
      
 0.598
dnali1
Dynein, axonemal, light intermediate chain 1.
      
 0.591
ift52
Intraflagellar transport 52 homolog (Chlamydomonas).
      
 0.591
b9d1
B9 protein domain 1.
    
 
 0.584
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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