STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A3GALT2Alpha 1,3-galactosyltransferase 2. (356 aa)    
Predicted Functional Partners:
gla
Alpha-galactosidase.
     
 0.911
LOC103462901
Uncharacterized protein.
  
  
 
0.902
b4galt5
UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5.
     
 0.831
LOC103466557
Beta-hexosaminidase.
     
 0.820
hexb
Beta-hexosaminidase.
     
 0.820
gal3st1
Galactose-3-O-sulfotransferase 1a.
     
 0.812
LOC103474668
Sialidase 4.
    
  0.804
LOC103473755
Uncharacterized protein.
     
 0.804
LOC103473216
Sialidase domain-containing protein.
    
  0.804
ENSPREP00000023699
Sialidase domain-containing protein.
    
  0.804
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.