STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slc46a2Solute carrier family 46 member 2. (516 aa)    
Predicted Functional Partners:
mfsd10
Major facilitator superfamily domain containing 10.
   
  
 0.569
mfsd9
Major facilitator superfamily domain containing 9.
   
  
 0.549
susd1
Sushi domain containing 1.
    
 
 0.530
tdrd3
Tudor domain containing 3.
      
 0.529
ENSPREP00000026998
Solute carrier family 29 member 4.
      
 0.444
slc29a3
Solute carrier family 29 member 3.
      
 0.440
glipr2
GLI pathogenesis-related 2, like; Belongs to the CRISP family.
      
 0.416
ctsc
Cathepsin C; Belongs to the peptidase C1 family.
      
 0.412
OTOR
Otoraplin.
      
 0.402
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.