STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
agpsAlkylglycerone-phosphate synthase; Catalyzes the exchange of an acyl for a long-chain alkyl group and the formation of the ether bond in the biosynthesis of ether phospholipids; Belongs to the FAD-binding oxidoreductase/transferase type 4 family. (637 aa)    
Predicted Functional Partners:
LOC103457687
Si:ch73-21k16.5; Belongs to the GPAT/DAPAT family.
   
 0.995
ENSPREP00000025224
PlsC domain-containing protein.
   
 0.977
pex7
Peroxisomal biogenesis factor 7.
     
 0.966
pex14
Peroxisomal biogenesis factor 14.
   
 0.890
scp2
Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.
   
 
 0.882
LOC103464006
Sterol carrier protein 2b.
   
 
 0.882
pex12
Peroxisome assembly protein 12; Required for protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.
     
 0.863
pex10
Peroxisomal biogenesis factor 10.
     
 0.861
LOC103460472
Peroxisomal biogenesis factor 5-like b.
    
 0.826
pex5
Peroxisomal biogenesis factor 5.
    
 0.826
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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