STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
api5Apoptosis inhibitor 5. (527 aa)    
Predicted Functional Partners:
polr2b
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
  
 0.965
tbc1d23
TBC1 domain family, member 23.
   
   0.919
ttc17
Tetratricopeptide repeat domain 17.
 
    
 0.768
LOC103475989
Apoptotic chromatin condensation inducer 1b.
   
 
 0.723
acin1
Apoptotic chromatin condensation inducer 1a.
   
 
 0.723
ENSPREP00000032376
SAP domain-containing protein.
   
 
 0.723
DDX39A
DExD-box helicase 39A.
   
 
 0.721
ddx39a
Uncharacterized protein.
   
 
 0.721
ilf3
Interleukin enhancer binding factor 3b.
   
 
 0.675
mcm9
Minichromosome maintenance 9 homologous recombination repair factor; Belongs to the MCM family.
    
   0.655
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.