STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPREP00000008006Formyl peptide receptor 1. (362 aa)    
Predicted Functional Partners:
LOC103466590
Annexin.
    
 0.687
LOC103460119
Annexin.
    
 0.687
anxa1
Annexin.
    
 0.687
LOC103465781
CCCTC-binding factor (zinc finger protein).
    
 0.589
CTCF
CCCTC-binding factor.
    
 0.585
hebp1
Uncharacterized protein.
     
 0.585
lmnb1
Lamin B1; Belongs to the intermediate filament family.
      
 0.518
has1
Hyaluronan synthase 1.
      
 0.497
LOC103462157
Lysyl oxidase-like 1.
    
 0.494
mmp28
Matrix metallopeptidase 28.
     
 0.490
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.