STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103474782Glycerophosphodiester phosphodiesterase domain containing 5b. (589 aa)    
Predicted Functional Partners:
gpd2
Glycerol-3-phosphate dehydrogenase 2 (mitochondrial).
  
 0.670
LOC103469802
Phosphatidate cytidylyltransferase; Provides CDP-diacylglycerol, an important precursor for the synthesis of phosphatidylinositol, phosphatidylglycerol, and cardiolipin.
      
 0.604
LOC103480192
Malic enzyme.
      
 0.525
l2hgdh
L-2-hydroxyglutarate dehydrogenase.
  
 
 0.524
cdipt
CDP-diacylglycerol--inositol 3-phosphatidyltransferase.
  
 
 0.515
acy1
Aminoacylase 1.
  
  
 0.489
LOC103479395
Acyl-CoA synthetase long chain family member 3b.
   
 
 0.483
idi1
Isopentenyl-diphosphate delta isomerase 1.
      
 0.474
acsbg2
Acyl-CoA synthetase bubblegum family member 2.
  
 
 0.443
ISYNA1
Inositol-3-phosphate synthase 1.
     
  0.404
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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