STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103478472Uncharacterized protein. (735 aa)    
Predicted Functional Partners:
plekhm3
Pleckstrin homology domain containing, family M, member 3.
  
     0.482
Ash1l
Uncharacterized protein.
  
  0.478
ppargc1a
Peroxisome proliferator-activated receptor gamma, coactivator 1 alpha.
  
     0.453
tnfrsf11a
Tumor necrosis factor receptor superfamily, member 11a, NFKB activator.
  
     0.448
LOC103460450
Solute carrier family 25 member 46; Belongs to the mitochondrial carrier (TC 2.A.29) family.
  
     0.431
Rhbdd2
Rhomboid domain-containing protein.
  
     0.422
LOC103478733
Uncharacterized protein.
  
     0.416
atxn1l
Ataxin 1-like.
  
 
   0.416
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.