STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103460673VPS9 domain-containing protein. (710 aa)    
Predicted Functional Partners:
als2
Alsin Rho guanine nucleotide exchange factor ALS2 b.
    
 0.730
amph
Amphiphysin.
   
 
 0.686
bin1
Bridging integrator 1a.
   
 
 0.686
LOC103457123
SH3 domain-containing protein.
   
 
 0.686
LOC103465414
Bridging integrator 2b.
   
 
 0.686
bin2
Bridging integrator 2a.
   
 
 0.686
CD2AP
CD2 associated protein.
    
 
 0.672
sh3d21
SH3 domain containing 21.
    
 
 0.672
sh3kbp1
SH3-domain kinase binding protein 1.
    
 
 0.672
LOC103462559
Furin (paired basic amino acid cleaving enzyme) a; Belongs to the peptidase S8 family.
    
 
 0.671
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.