STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GRIK3Glutamate ionotropic receptor kainate type subunit 3. (918 aa)    
Predicted Functional Partners:
chrna1
Cholinergic receptor, nicotinic, alpha 1 (muscle).
    
 
 0.683
SLC5A7
Solute carrier family 5 member 7; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
      
 0.646
grik5
Glutamate receptor, ionotropic, kainate 5.
  
 
0.622
LOC103472527
Uncharacterized protein.
  
 
0.620
grik4
Glutamate receptor, ionotropic, kainate 4.
  
 
0.615
ptprg
Carbonic anhydrase XVI b.
   
  
 0.539
ENSPREP00000017519
Potassium voltage-gated channel, Shal-related subfamily, member 1; Belongs to the potassium channel family.
   
  
 0.536
LOC103470979
Teneurin transmembrane protein 1.
   
  
 0.535
LOC103463439
Protein tyrosine phosphatase receptor type Sa.
      
 0.532
LOC103479283
Protein tyrosine phosphatase receptor type Sa.
      
 0.532
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.