STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
asmtlAcetylserotonin O-methyltransferase-like. (661 aa)    
Predicted Functional Partners:
tdo2
Tryptophan 2,3-dioxygenase; Heme-dependent dioxygenase that catalyzes the oxidative cleavage of the L-tryptophan (L-Trp) pyrrole ring and converts L- tryptophan to N-formyl-L-kynurenine. Catalyzes the oxidative cleavage of the indole moiety.
    
 
 0.941
LOC103473429
Uridine-cytidine kinase 1.
  
 
 0.924
ENSPREP00000003198
Uridine-cytidine kinase; Belongs to the uridine kinase family.
  
 
 0.924
LOC103479008
Uridine-cytidine kinase; Belongs to the uridine kinase family.
  
 
 0.924
LOC103464002
Uridine-cytidine kinase; Belongs to the uridine kinase family.
  
 
 0.924
uckl1
Uridine-cytidine kinase; Belongs to the uridine kinase family.
  
 
 0.924
LOC103457224
Uridine-cytidine kinase; Belongs to the uridine kinase family.
  
 
 0.924
tyms
Thymidylate synthetase.
     
  0.915
ctps1
CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen.
  
 0.912
dtymk
Deoxythymidylate kinase (thymidylate kinase).
  
 
  0.911
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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