STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
scaf1SR-related CTD-associated factor 1. (1358 aa)    
Predicted Functional Partners:
INSC
INSC spindle orientation adaptor protein.
   
  
 0.843
sh3pxd2b
SH3 and PX domains 2B.
      
 0.839
prr12
Proline rich 12a.
   
  
 0.710
hmmr
Hyaluronan-mediated motility receptor (RHAMM).
    
 
 0.665
ENSPREP00000003031
Uncharacterized protein.
      
 0.534
ankrd6
Ankyrin repeat domain 6.
    
 
 0.531
ENSPREP00000004657
Amyloid beta (A4) precursor protein-binding, family B, member 3.
    
 
 0.526
med25
Mediator complex subunit 25.
   
  
 0.500
ENSPREP00000020080
CSD domain-containing protein.
  
     0.481
ENSPREP00000015863
Si:ch73-105b23.6.
  
     0.449
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.